STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RXV6_TRIADSMC_N domain-containing protein. (320 aa)    
Predicted Functional Partners:
B3RUA7_TRIAD
SCD domain-containing protein.
   
 0.989
B3S903_TRIAD
SMC hinge domain-containing protein.
  
0.989
B3RXV5_TRIAD
SMC_N domain-containing protein.
 
  
  0.976
B3S7L9_TRIAD
SMC_N domain-containing protein.
 
 
 0.973
B3S1Y0_TRIAD
Uncharacterized protein.
   
 0.951
B3S291_TRIAD
Rad21_Rec8_N domain-containing protein.
   
 0.951
B3RXF6_TRIAD
Uncharacterized protein.
   
 0.950
B3S1Q2_TRIAD
Nipped-B protein.
   
 0.947
B3S755_TRIAD
Serine/threonine-protein kinase PLK.
   
 0.904
B3RX89_TRIAD
Predicted protein.
   
 0.849
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.