STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RZV6_TRIADUncharacterized protein. (526 aa)    
Predicted Functional Partners:
B3RZR1_TRIAD
Uncharacterized protein.
 
   
  0.903
B3SC85_TRIAD
Uncharacterized protein.
 
   
  0.901
B3RNJ3_TRIAD
Uncharacterized protein.
 
   
  0.880
B3RXE3_TRIAD
Uncharacterized protein.
 
  
  0.836
B3S0P5_TRIAD
Uncharacterized protein.
 
   
  0.663
B3SDN9_TRIAD
CARD domain-containing protein.
   
 0.611
B3SDB2_TRIAD
Uncharacterized protein.
  
 
  0.425
B3RZW6_TRIAD
Uncharacterized protein.
  
 
  0.409
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.