B3S061_TRIAD protein (Trichoplax adhaerens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B3S061_TRIAD

Nudix hydrolase domain-containing protein. (285 aa)

Predicted Functional Partners:

B3RU36_TRIAD

0.754

B3RRQ6_TRIAD

0.707

B3SFJ5_TRIAD

0.658

B3RX49_TRIAD

0.607

B3S6T8_TRIAD

0.602

B3RZA2_TRIAD

0.584

B3RPI4_TRIAD

0.546

B3S661_TRIAD

0.545

B3RVK6_TRIAD

0.538

B3S8K4_TRIAD

0.537

Your Current Organism:

Trichoplax adhaerens

NCBI taxonomy Id: 10228
Other names: T. adhaerens

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3RPI4_TRIAD	B3S061_TRIAD	B3RPI4	B3S061	Protein kinase domain-containing protein.	Nudix hydrolase domain-containing protein.	0.546
B3RRQ6_TRIAD	B3RU36_TRIAD	B3RRQ6	B3RU36	PAT1 domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.935
B3RRQ6_TRIAD	B3RZA2_TRIAD	B3RRQ6	B3RZA2	PAT1 domain-containing protein.	XRN_N domain-containing protein.	0.973
B3RRQ6_TRIAD	B3S061_TRIAD	B3RRQ6	B3S061	PAT1 domain-containing protein.	Nudix hydrolase domain-containing protein.	0.707
B3RRQ6_TRIAD	B3S6T8_TRIAD	B3RRQ6	B3S6T8	PAT1 domain-containing protein.	Predicted protein.	0.948
B3RU36_TRIAD	B3RRQ6_TRIAD	B3RU36	B3RRQ6	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	PAT1 domain-containing protein.	0.935
B3RU36_TRIAD	B3RZA2_TRIAD	B3RU36	B3RZA2	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	XRN_N domain-containing protein.	0.893
B3RU36_TRIAD	B3S061_TRIAD	B3RU36	B3S061	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Nudix hydrolase domain-containing protein.	0.754
B3RU36_TRIAD	B3S6T8_TRIAD	B3RU36	B3S6T8	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Predicted protein.	0.891
B3RVK6_TRIAD	B3S061_TRIAD	B3RVK6	B3S061	TPR_REGION domain-containing protein.	Nudix hydrolase domain-containing protein.	0.538
B3RX49_TRIAD	B3S061_TRIAD	B3RX49	B3S061	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Nudix hydrolase domain-containing protein.	0.607
B3RZA2_TRIAD	B3RRQ6_TRIAD	B3RZA2	B3RRQ6	XRN_N domain-containing protein.	PAT1 domain-containing protein.	0.973
B3RZA2_TRIAD	B3RU36_TRIAD	B3RZA2	B3RU36	XRN_N domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.893
B3RZA2_TRIAD	B3S061_TRIAD	B3RZA2	B3S061	XRN_N domain-containing protein.	Nudix hydrolase domain-containing protein.	0.584
B3RZA2_TRIAD	B3S6T8_TRIAD	B3RZA2	B3S6T8	XRN_N domain-containing protein.	Predicted protein.	0.905
B3S061_TRIAD	B3RPI4_TRIAD	B3S061	B3RPI4	Nudix hydrolase domain-containing protein.	Protein kinase domain-containing protein.	0.546
B3S061_TRIAD	B3RRQ6_TRIAD	B3S061	B3RRQ6	Nudix hydrolase domain-containing protein.	PAT1 domain-containing protein.	0.707
B3S061_TRIAD	B3RU36_TRIAD	B3S061	B3RU36	Nudix hydrolase domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.754
B3S061_TRIAD	B3RVK6_TRIAD	B3S061	B3RVK6	Nudix hydrolase domain-containing protein.	TPR_REGION domain-containing protein.	0.538
B3S061_TRIAD	B3RX49_TRIAD	B3S061	B3RX49	Nudix hydrolase domain-containing protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.607