STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S0C7_TRIADUncharacterized protein. (240 aa)    
Predicted Functional Partners:
B3RV64_TRIAD
Uncharacterized protein.
   
 0.973
RTCB_TRIAD
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
   
 0.954
B3SAL3_TRIAD
Uncharacterized protein.
    
 0.930
B3S1I0_TRIAD
Archease domain-containing protein.
     
 0.716
B3RQN9_TRIAD
AD domain-containing protein.
    
 
 0.582
B3SBV6_TRIAD
Uncharacterized protein.
   
  
 0.561
B3RMA1_TRIAD
Uncharacterized protein.
   
 
 0.511
B3RHZ1_TRIAD
Uncharacterized protein.
   
  
 0.474
B3S287_TRIAD
Uncharacterized protein.
      
 0.463
B3S7N1_TRIAD
Thioredoxin domain-containing protein.
      
 0.463
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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