STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S0W2_TRIADUncharacterized protein. (173 aa)    
Predicted Functional Partners:
B3RIM1_TRIAD
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.992
B3S9P3_TRIAD
Uncharacterized protein.
    
 0.974
B3RUG6_TRIAD
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.966
TRIADDRAFT_936
WD_REPEATS_REGION domain-containing protein.
    
 0.913
B3RRT0_TRIAD
Predicted protein.
    
 0.841
B3RSZ8_TRIAD
WD_REPEATS_REGION domain-containing protein.
    
 
 0.839
B3RYX6_TRIAD
Small nuclear ribonucleoprotein Sm D3.
    
 0.645
B3S395_TRIAD
Small nuclear ribonucleoprotein G.
   
  0.642
B3RVE2_TRIAD
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.608
B3S0D5_TRIAD
Sm domain-containing protein.
    
  0.459
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.