STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S1D0_TRIADUncharacterized protein. (504 aa)    
Predicted Functional Partners:
B3RPJ9_TRIAD
Histone acetyltransferase type B catalytic subunit.
   
 
 0.993
B3S4Y0_TRIAD
Uncharacterized protein.
   
 
 0.977
B3S9N2_TRIAD
Retinoblastoma-binding protein 4.
   
 
 0.951
B3RUM8_TRIAD
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.934
B3RNV3_TRIAD
Histone domain-containing protein.
   
 
 0.689
B3RWE2_TRIAD
Histone H3; Belongs to the histone H3 family.
   
 
 0.689
B3RZQ5_TRIAD
Histone H3; Belongs to the histone H3 family.
   
 
 0.689
B3S516_TRIAD
WD_REPEATS_REGION domain-containing protein.
      
 0.676
B3S8U3_TRIAD
SLBP_RNA_bind domain-containing protein.
   
  
 0.675
B3RYT0_TRIAD
UBR-type domain-containing protein.
   
 
 0.649
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.