STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S1H1_TRIADCalponin-homology (CH) domain-containing protein. (7668 aa)    
Predicted Functional Partners:
B3RR98_TRIAD
Uncharacterized protein.
    
 0.657
B3RT85_TRIAD
Integrin beta.
    
 0.621
B3RT92_TRIAD
Integrin beta.
    
 0.621
B3RT93_TRIAD
Integrin beta; Belongs to the integrin beta chain family.
    
 0.621
B3S246_TRIAD
EB1 C-terminal domain-containing protein.
    
 
 0.593
B3RIP9_TRIAD
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.524
B3RJX8_TRIAD
Calmodulin; Belongs to the calmodulin family.
    
 
 0.499
B3S6I6_TRIAD
Uncharacterized protein.
   
 0.494
B3RIM6_TRIAD
Uncharacterized protein.
    
 0.489
B3S639_TRIAD
Rho-GAP domain-containing protein.
     
 0.485
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.