STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S2E2_TRIADHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (565 aa)    
Predicted Functional Partners:
B3S0E8_TRIAD
ARID domain-containing protein.
    
 0.993
B3S625_TRIAD
Uncharacterized protein.
    
 0.954
B3RLH1_TRIAD
Uncharacterized protein.
   
 0.946
B3RZT5_TRIAD
Hist_deacetyl domain-containing protein.
  
  
 
0.905
B3S9N2_TRIAD
Retinoblastoma-binding protein 4.
   
 0.852
B3RI28_TRIAD
HDAC_interact domain-containing protein.
   
 0.843
B3RR05_TRIAD
Cir_N domain-containing protein.
    
 0.822
B3S670_TRIAD
Uncharacterized protein.
    
 0.816
B3SAN1_TRIAD
Uncharacterized protein.
    
 0.803
B3RM39_TRIAD
Uncharacterized protein.
   
 0.799
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.