STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S2I1_TRIADUroporphyrinogen_deCOase domain-containing protein. (368 aa)    
Predicted Functional Partners:
B3S8P8_TRIAD
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.990
B3RVP9_TRIAD
Uncharacterized protein.
  
 0.959
B3RYM5_TRIAD
Uncharacterized protein.
  
 0.959
B3RTQ8_TRIAD
Uncharacterized protein.
 
 0.907
B3S2H7_TRIAD
Uroporphyrinogen_deCOase domain-containing protein.
  
  
 
0.901
B3RU18_TRIAD
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.883
B3S4K3_TRIAD
Flavodoxin-like domain-containing protein.
    
  0.627
B3SFD4_TRIAD
Uncharacterized protein.
  
 0.608
B3RQG2_TRIAD
Uncharacterized protein.
  
  
 0.595
B3SAV0_TRIAD
Elp3 domain-containing protein.
    
  0.592
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.