STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S4R4_TRIADLITAF domain-containing protein. (70 aa)    
Predicted Functional Partners:
B3RYW6_TRIAD
Uncharacterized protein.
    
 0.994
B3SBM1_TRIAD
Uncharacterized protein.
   
 0.620
B3SAR3_TRIAD
Uncharacterized protein.
    
 0.538
B3S656_TRIAD
CRC domain-containing protein.
    
 0.526
B3S9N2_TRIAD
Retinoblastoma-binding protein 4.
    
 0.526
B3RLV4_TRIAD
DIRP domain-containing protein.
    
 0.498
B3RU43_TRIAD
dUTPase domain-containing protein.
    
 0.485
B3S8C5_TRIAD
OB domain-containing protein.
    
 0.431
B3S571_TRIAD
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.430
B3SEU1_TRIAD
Rep-A_N domain-containing protein.
    
 0.430
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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