STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3SC30_TRIADRab-GAP TBC domain-containing protein. (491 aa)    
Predicted Functional Partners:
B3RID8_TRIAD
Rab7 protein.
    
 0.957
B3RVL5_TRIAD
Uncharacterized protein.
   
 0.948
B3S0A0_TRIAD
Gabarap protein.
   
 0.948
B3RM85_TRIAD
Rab-GAP TBC domain-containing protein.
  
  
 
0.906
B3RUA5_TRIAD
Uncharacterized protein.
     
 0.904
B3RYI6_TRIAD
Uncharacterized protein.
    
 0.524
B3S5B2_TRIAD
Predicted protein.
    
 0.524
B3RJP6_TRIAD
Uncharacterized protein.
      
 0.472
B3RVH2_TRIAD
Rab-GAP TBC domain-containing protein.
      
 0.469
B3RPK0_TRIAD
Rab-GAP TBC domain-containing protein.
      
0.455
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.