STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS954Homeobox domain-containing protein. (541 aa)    
Predicted Functional Partners:
HNAJ_LOCUS1173
NR LBD domain-containing protein.
      
 0.548
HNAJ_LOCUS9821
Uncharacterized protein.
    
 
 0.492
HNAJ_LOCUS9975
Uncharacterized protein.
    
 
 0.473
HNAJ_LOCUS8916
Uncharacterized protein.
    
 
 0.446
HNAJ_LOCUS9494
WD_REPEATS_REGION domain-containing protein.
    
 
 0.446
A0A0R3TX29
C2H2-type domain-containing protein.
   
  
 0.433
HNAJ_LOCUS472
Uncharacterized protein.
    
 
 0.401
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.