STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS5476Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
HNAJ_LOCUS568
Uncharacterized protein.
    
 0.979
A0A0R3T3W3
Uncharacterized protein.
  
 0.964
A0A0R3TVT5
PDZ domain-containing protein.
   
 0.911
HNAJ_LOCUS9
Uncharacterized protein.
   
 0.911
HNAJ_LOCUS1385
Uncharacterized protein.
   
 0.869
HNAJ_LOCUS332
Uncharacterized protein.
   
 0.869
HNAJ_LOCUS9804
Uncharacterized protein.
    
 0.831
HNAJ_LOCUS9805
Uncharacterized protein.
    
 0.831
A0A0R3TRV9
DH domain-containing protein.
    
 0.802
A0A0R3TY09
DH domain-containing protein.
    
 0.802
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.