STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS5581Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
A0A0R3T4R8
Uncharacterized protein.
    
 0.917
A0A0R3T9D0
PDZ domain-containing protein.
    
  0.907
A0A0R3T3W3
Uncharacterized protein.
    
 0.870
HNAJ_LOCUS1472
Uncharacterized protein.
    
 0.829
HNAJ_LOCUS4964
Uncharacterized protein.
    
 0.829
HNAJ_LOCUS774
Uncharacterized protein.
    
 0.829
HNAJ_LOCUS785
RanBD1 domain-containing protein.
    
 0.805
HNAJ_LOCUS4220
C2 domain-containing protein.
    
  0.756
HNAJ_LOCUS9495
WD_REPEATS_REGION domain-containing protein.
    
 0.742
A0A0R3TWN0
B30.2/SPRY domain-containing protein.
    
 0.735
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.