STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS7726CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (234 aa)    
Predicted Functional Partners:
A0A0R3T3W3
Uncharacterized protein.
    
 0.980
HNAJ_LOCUS7710
PH domain-containing protein.
    
 0.961
A0A158QIR6
Uncharacterized protein.
   
 0.919
HNAJ_LOCUS8017
Uncharacterized protein.
    
 0.889
HNAJ_LOCUS5903
WD_REPEATS_REGION domain-containing protein.
    
 0.854
A0A0R3TJA9
Uncharacterized protein.
   
 0.802
HNAJ_LOCUS7147
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.802
HNAJ_LOCUS2482
Uncharacterized protein.
   
 0.792
A0A0R3TF01
Uncharacterized protein.
   
 0.792
HNAJ_LOCUS9662
FERM domain-containing protein.
   
 0.792
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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