STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R3TVQ3Nudix hydrolase domain-containing protein. (354 aa)    
Predicted Functional Partners:
HNAJ_LOCUS3725
mRNA_decap_C domain-containing protein.
    
 0.995
HNAJ_LOCUS8911
Ge1_WD40 domain-containing protein.
    
 0.982
A0A158QIV7
Uncharacterized protein.
   
 0.970
HNAJ_LOCUS8996
Uncharacterized protein.
  
 0.953
HNAJ_LOCUS107
Uncharacterized protein.
   
 0.914
HNAJ_LOCUS7984
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.914
HNAJ_LOCUS5925
Sm domain-containing protein.
    
 0.912
A0A0R3T4R8
Uncharacterized protein.
  
 0.902
A0A0R3TUL0
Uncharacterized protein.
  
 0.895
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.894
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.