STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS150SRP72 domain-containing protein. (706 aa)    
Predicted Functional Partners:
HNAJ_LOCUS2376
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
    
 0.999
HNAJ_LOCUS8475
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.999
HNAJ_LOCUS889
Uncharacterized protein.
    
 0.998
HNAJ_LOCUS1371
Uncharacterized protein.
    
 0.998
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.998
HNAJ_LOCUS2696
Uncharacterized protein.
    
 
 0.977
HNAJ_LOCUS5372
Uncharacterized protein.
   
 0.965
A0A0R3TI67
SRP54 domain-containing protein.
   
 0.965
HNAJ_LOCUS6061
Uncharacterized protein.
    
  0.963
A0A0R3TZK4
Ribosomal_L23eN domain-containing protein.
    
 0.963
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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