STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS1022DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (742 aa)    
Predicted Functional Partners:
HNAJ_LOCUS9651
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.925
A0A0R3TR48
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.908
A0A0R3TZQ0
Uncharacterized protein.
   
 0.908
A0A0R3TR49
Uncharacterized protein.
   
 0.900
A0A0R3TJ74
Uncharacterized protein.
 
     0.883
HNAJ_LOCUS2274
Uncharacterized protein.
    
 0.766
HNAJ_LOCUS9739
Uncharacterized protein.
    
 0.766
A0A0R3TR20
HMG box domain-containing protein.
    
 0.766
A0A0R3TXB0
Uncharacterized protein.
    
 0.766
HNAJ_LOCUS2412
Uncharacterized protein.
    
 0.753
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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