Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALT82139.1 | ALT82203.1 | AU079_01850 | AU079_02260 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
ALT82139.1 | ALT82630.1 | AU079_01850 | AU079_04640 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
ALT82203.1 | ALT82139.1 | AU079_02260 | AU079_01850 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
ALT82203.1 | ALT82204.1 | AU079_02260 | AU079_02265 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oleate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
ALT82203.1 | ALT82630.1 | AU079_02260 | AU079_04640 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.615 |
ALT82203.1 | ALT82943.1 | AU079_02260 | AU079_06445 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oleate hydratase; In group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
ALT82203.1 | valS | AU079_02260 | AU079_02255 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.402 |
ALT82204.1 | ALT82203.1 | AU079_02265 | AU079_02260 | Oleate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
ALT82630.1 | ALT82139.1 | AU079_04640 | AU079_01850 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
ALT82630.1 | ALT82203.1 | AU079_04640 | AU079_02260 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.615 |
ALT82943.1 | ALT82203.1 | AU079_06445 | AU079_02260 | Oleate hydratase; In group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
valS | ALT82203.1 | AU079_02255 | AU079_02260 | valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |