STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALT82637.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)    
Predicted Functional Partners:
ALT82638.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
ALT82639.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.889
ALT82640.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.876
ALT82641.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.866
graR
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.567
yycF
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.543
ALT82628.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.517
ciaR
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.512
mprA
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.507
srrA
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.488
Your Current Organism:
Streptococcus infantarius
NCBI taxonomy Id: 102684
Other names: ATCC BAA-102, ATCC:BAA:102, CCUG 43820, CIP 103233, DSM 22960, NCDO 599, NCIMB 700599, NCTC 13760, S. infantarius, Streptococcus infantarius Schlegel et al. 2000, strain HDP 90056
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.