STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGL55727.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
EGL55726.1
Hypothetical protein.
       0.693
EGL55728.1
Expression up-regulator, SirB.
       0.572
EGL54465.1
Hypothetical protein.
  
     0.487
EGL55729.1
Nitric oxide reductase large subunit.
  
    0.450
EGL53635.1
Hypothetical protein.
  
     0.445
EGL53339.1
Hypothetical protein.
  
     0.437
EGL54461.1
Secreted protein, containing von Willebrand factor type A domain containing protein; Overlaps another CDS with the same product name.
  
     0.424
Your Current Organism:
Methylophaga aminisulfidivorans
NCBI taxonomy Id: 1026882
Other names: M. aminisulfidivorans MP, Methylophaga aminisulfidivorans MP, Methylophaga aminisulfidivorans SK1, Methylophaga aminisulfidivorans str. MP, Methylophaga aminisulfidivorans strain MP
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.