STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG13063.1Succinylglutamate desuccinylase / Aspartoacylase family protein. (398 aa)    
Predicted Functional Partners:
SMG13059.1
CBS domain-containing protein.
 
     0.950
SMG18167.1
Hypothetical protein.
  
     0.676
SMG43150.1
Hypothetical protein.
  
  
  0.578
SMG46948.1
Hypothetical protein.
  
     0.577
SMG35080.1
Hypothetical protein.
  
     0.572
SMG08478.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.515
SMG16499.1
O-succinylbenzoate synthase.
    
  0.508
SMG16534.1
Hypothetical protein.
  
     0.486
SMG24664.1
Muramoyltetrapeptide carboxypeptidase.
    
  0.482
SMG52485.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
  
     0.476
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.