Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG14336.1 | SMG17736.1 | SAMN05661096_00667 | SAMN05661096_00990 | glutaminyl-tRNA synthetase. | Amidase. | 0.849 |
SMG14336.1 | SMG20784.1 | SAMN05661096_00667 | SAMN05661096_01122 | glutaminyl-tRNA synthetase. | Glutamate synthase (NADPH/NADH) large chain. | 0.923 |
SMG14336.1 | asnS | SAMN05661096_00667 | SAMN05661096_00036 | glutaminyl-tRNA synthetase. | asparaginyl-tRNA synthetase. | 0.793 |
SMG14336.1 | aspS | SAMN05661096_00667 | SAMN05661096_04077 | glutaminyl-tRNA synthetase. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.623 |
SMG14336.1 | gatB | SAMN05661096_00667 | SAMN05661096_03365 | glutaminyl-tRNA synthetase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.965 |
SMG14336.1 | gatC | SAMN05661096_00667 | SAMN05661096_02093 | glutaminyl-tRNA synthetase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.876 |
SMG14336.1 | guaA | SAMN05661096_00667 | SAMN05661096_03492 | glutaminyl-tRNA synthetase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.699 |
SMG14859.1 | SMG17736.1 | SAMN05661096_00711 | SAMN05661096_00990 | Antagonist of KipI. | Amidase. | 0.871 |
SMG14859.1 | SMG20784.1 | SAMN05661096_00711 | SAMN05661096_01122 | Antagonist of KipI. | Glutamate synthase (NADPH/NADH) large chain. | 0.861 |
SMG17736.1 | SMG14336.1 | SAMN05661096_00990 | SAMN05661096_00667 | Amidase. | glutaminyl-tRNA synthetase. | 0.849 |
SMG17736.1 | SMG14859.1 | SAMN05661096_00990 | SAMN05661096_00711 | Amidase. | Antagonist of KipI. | 0.871 |
SMG17736.1 | SMG20784.1 | SAMN05661096_00990 | SAMN05661096_01122 | Amidase. | Glutamate synthase (NADPH/NADH) large chain. | 0.934 |
SMG17736.1 | SMG25137.1 | SAMN05661096_00990 | SAMN05661096_01525 | Amidase. | Carbamoyl-phosphate synthase large subunit. | 0.749 |
SMG17736.1 | asnS | SAMN05661096_00990 | SAMN05661096_00036 | Amidase. | asparaginyl-tRNA synthetase. | 0.864 |
SMG17736.1 | aspS | SAMN05661096_00990 | SAMN05661096_04077 | Amidase. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.815 |
SMG17736.1 | gatB | SAMN05661096_00990 | SAMN05661096_03365 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.988 |
SMG17736.1 | gatC | SAMN05661096_00990 | SAMN05661096_02093 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.978 |
SMG17736.1 | gltX | SAMN05661096_00990 | SAMN05661096_03957 | Amidase. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.858 |
SMG17736.1 | guaA | SAMN05661096_00990 | SAMN05661096_03492 | Amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.834 |
SMG20784.1 | SMG14336.1 | SAMN05661096_01122 | SAMN05661096_00667 | Glutamate synthase (NADPH/NADH) large chain. | glutaminyl-tRNA synthetase. | 0.923 |
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