STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG29149.1Type IX secretion system membrane protein, PorP/SprF family. (319 aa)    
Predicted Functional Partners:
SMG29143.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.866
SMG13036.1
WD40-like Beta Propeller Repeat.
 
     0.763
SMG53952.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.759
SMG53212.1
Outer membrane protein beta-barrel domain-containing protein.
 
   
 0.756
SMG41693.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.718
SMG21178.1
Tetratricopeptide repeat-containing protein.
  
   
 0.711
SMG09654.1
WD40-like Beta Propeller Repeat.
  
     0.690
SMG47384.1
Protein of unknown function.
  
     0.686
SMG33987.1
WD40-like Beta Propeller Repeat.
  
     0.676
SMG47984.1
Outer membrane protein OmpA.
  
     0.665
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.