STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG35303.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
SMG37305.1
Tetratricopeptide repeat-containing protein.
  
     0.769
SMG53660.1
Hypothetical protein.
  
     0.769
SMG20216.1
ATP10 protein.
  
     0.768
SMG28619.1
Hypothetical protein.
  
     0.758
SMG20049.1
Hypothetical protein.
  
     0.736
SMG27634.1
Hypothetical protein.
  
     0.707
SMG17640.1
Hypothetical protein.
  
     0.698
SMG32870.1
Hypothetical protein.
  
     0.697
SMG33534.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.697
SMG21472.1
Putative signal transducing protein.
  
     0.669
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.