STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG35594.1REJ domain-containing protein. (758 aa)    
Predicted Functional Partners:
SMG30278.1
PKD domain-containing protein.
  
     0.567
SMG43025.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
  0.548
SMG42313.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.507
SMG35607.1
AraC-type DNA-binding protein.
       0.496
SMG50224.1
Kelch motif-containing protein.
  
     0.492
SMG35584.1
PQQ-like domain-containing protein.
       0.471
SMG15207.1
Repeat domain-containing protein.
  
     0.454
SMG30273.1
PKD domain-containing protein.
  
  
  0.450
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.