STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG43284.1Glutamate dehydrogenase/leucine dehydrogenase. (408 aa)    
Predicted Functional Partners:
SMG20784.1
Glutamate synthase (NADPH/NADH) large chain.
  
 0.999
SMG13117.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.913
SMG13319.1
Hypothetical protein.
    
 0.913
SMG07596.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.869
SMG23795.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.792
SMG35494.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.792
SMG18145.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.755
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 0.669
SMG16469.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 0.661
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.661
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.