STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG48468.1Pimeloyl-ACP methyl ester carboxylesterase. (300 aa)    
Predicted Functional Partners:
SMG48464.1
Iron complex outermembrane recepter protein.
 
     0.844
SMG48475.1
Sodium/pantothenate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.691
SMG48473.1
fatty-acyl-CoA synthase.
 
 
  0.678
SMG08203.1
3-oxoacid CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
  
 
 0.644
SMG13117.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.590
SMG13319.1
Hypothetical protein.
  
 
  0.590
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.555
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.555
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.545
SMG27297.1
Acyl-coenzyme A oxidase.
  
  0.537
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
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