STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG48793.1Two component transcriptional regulator, LytTR family. (251 aa)    
Predicted Functional Partners:
SMG48785.1
Histidine kinase.
 
  0.972
SMG38117.1
Histidine kinase.
 
  0.882
SMG10690.1
Histidine kinase.
  
  0.860
SMG21020.1
Histidine kinase.
  
  0.860
SMG29019.1
Histidine kinase.
  
  0.860
SMG40268.1
Histidine kinase.
  
  0.860
SMG50771.1
7TM diverse intracellular signalling.
  
  0.860
SMG52029.1
Histidine kinase.
  
  0.860
SMG53426.1
Two component transcriptional regulator, LytTR family.
  
  
  0.793
SMG27776.1
Two component transcriptional regulator, LytTR family.
  
  
 
0.640
Your Current Organism:
Marivirga sericea
NCBI taxonomy Id: 1028
Other names: ATCC 23182, DSM 4125, IFO 15983, LMG 13021, LMG:13021, M. sericea, Microscilla sericea, NBRC 15983
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.