STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQC39479.1Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa)    
Predicted Functional Partners:
KQC39478.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
KQC38342.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.992
KQC38256.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.967
KQC37243.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.945
KQC39808.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.723
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.655
KQC38028.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.610
KQC40270.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.595
KQC35392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.561
KQC35220.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.561
Your Current Organism:
Frankia sp. ACN1ag
NCBI taxonomy Id: 102891
Other names: F. sp. ACN1ag
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.