STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQC38618.1Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
KQC38616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.812
KQC38617.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KQC38614.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.707
KQC36054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.693
KQC35342.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.687
KQC38615.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.649
KQC39784.1
Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.607
KQC35341.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.604
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.564
KQC40064.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
Your Current Organism:
Frankia sp. ACN1ag
NCBI taxonomy Id: 102891
Other names: F. sp. ACN1ag
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.