STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQC38353.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (742 aa)    
Predicted Functional Partners:
KQC39800.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.821
KQC39617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.795
KQC39806.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.739
KQC38982.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.715
KQC35362.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.710
KQC36554.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.554
KQC36555.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.554
KQC35259.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.547
KQC38255.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.497
KQC37801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.497
Your Current Organism:
Frankia sp. ACN1ag
NCBI taxonomy Id: 102891
Other names: F. sp. ACN1ag
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