STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSCI_1950LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
PSCI_3124
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.715
PSCI_4476
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.715
PSCI_4961
LysR family regulatory helix-turn-helix protein 30; Belongs to the LysR transcriptional regulatory family.
  
     0.702
PSCI_4262
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.673
PSCI_5207
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.672
PSCI_2544
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.662
PSCI_0859
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.661
PSCI_0243
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.660
PSCI_3324
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.659
PSCI_1951
Lysine exporter protein LysE/YggA.
 
     0.657
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.