STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSCI_3547Aldehyde dehydrogenase. (686 aa)    
Predicted Functional Partners:
PSCI_3560
enoyl-CoA hydratase.
 
 0.970
PSCI_3552
phenylacetate-CoA oxygenase subunit PaaJ.
 
  
 0.940
paaA
phenylacetate-CoA oxygenase subunit PaaA.
 
  
 0.939
paaK
phenylacetate-CoA oxygenase, PaaK subunit.
 
  
 0.934
PSCI_3553
phenylacetate-CoA oxygenase subunit PaaI.
 
  
 0.932
PSCI_3554
phenylacetate-CoA oxygenase subunit PaaB.
 
  
 0.923
PSCI_3558
Phenylacetic acid degradation protein.
 
  
 0.856
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.778
PSCI_3556
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 
 0.776
PSCI_2950
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.752
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.