STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSCI_4164Nitrite transporter. (887 aa)    
Predicted Functional Partners:
PSCI_4163
Respiratory nitrate reductase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.996
PSCI_4160
Respiratory nitrate reductase, gamma subunit.
 
 
 0.995
PSCI_4162
Respiratory nitrate reductase subunit beta.
 
 
 0.995
PSCI_4161
Repiratory nitrate reductase, subunit delta.
 
  
 0.958
PSCI_3876
Major facilitator superfamily MFS_1.
 
 
0.943
PSCI_5133
Nitrite reductase [NAD(P)H], small subunit.
 
 
 0.930
PSCI_3874
Nitrite reductase (NAD(P)H), large subunit.
 
 
 0.929
PSCI_5132
FAD-dependent pyridine nucleotide-disulphide oxidoreductase:nitrite/sulfite reductase, hemoprotein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.929
PSCI_3873
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.915
PSCI_4756
2-nitropropane dioxygenase.
  
 
 0.910
Your Current Organism:
Pseudomonas sp. StFLB209
NCBI taxonomy Id: 1028989
Other names: P. sp. StFLB209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.