STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFBM_0388Abortive infection protein. (328 aa)    
Predicted Functional Partners:
SFBM_0387
Phage scaffold protein.
 
     0.808
SFBM_0389
Abortive infection protein.
       0.773
SFBM_0087
Hypothetical protein.
 
     0.763
SFBM_0386
Hypothetical protein.
       0.473
SFBM_0383
Phage portal protein, SPP1 family.
 
     0.424
SFBM_0384
Hypothetical protein; N-ter similar to a part of head morphogenesis protein.
       0.415
SFBM_0385
Hypothetical protein.
       0.415
Your Current Organism:
Arthromitus sp. SFBmouseJapan
NCBI taxonomy Id: 1029718
Other names: C. Arthromitus sp. SFB-mouse-Japan, Candidatus Arthromitus sp. SFB-mouse-Japan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.