STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFBM_0495CotS family spore coat protein. (334 aa)    
Predicted Functional Partners:
SFBM_0496
Spore coat protein.
  
    0.855
SFBM_0882
Glycosyltransferase.
 
    0.749
SFBM_0497
Hypothetical protein.
       0.727
SFBM_0971
Stage III sporulation protein AE.
  
     0.684
SFBM_1496
Serine protease Csp.
  
    0.653
SFBM_0968
Hypothetical protein.
  
     0.628
SFBM_1474
Hypothetical protein.
  
     0.626
SFBM_1296
Hypothetical protein.
 
     0.609
SFBM_0494
Hypothetical protein.
 
     0.602
SFBM_0314
Stage V sporulation protein B.
  
     0.583
Your Current Organism:
Arthromitus sp. SFBmouseJapan
NCBI taxonomy Id: 1029718
Other names: C. Arthromitus sp. SFB-mouse-Japan, Candidatus Arthromitus sp. SFB-mouse-Japan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.