Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFBM_0676 | SFBM_0715 | SFBM_0676 | SFBM_0715 | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | Mg chelatase. | 0.481 |
| SFBM_0676 | SFBM_0716 | SFBM_0676 | SFBM_0716 | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | DNA protecting protein DprA. | 0.456 |
| SFBM_0676 | pheT | SFBM_0676 | SFBM_0479 | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.467 |
| SFBM_0676 | rplS | SFBM_0676 | SFBM_0672 | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.420 |
| SFBM_0676 | topA | SFBM_0676 | SFBM_0717 | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.416 |
| SFBM_0715 | SFBM_0676 | SFBM_0715 | SFBM_0676 | Mg chelatase. | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | 0.481 |
| SFBM_0715 | SFBM_0716 | SFBM_0715 | SFBM_0716 | Mg chelatase. | DNA protecting protein DprA. | 0.985 |
| SFBM_0715 | topA | SFBM_0715 | SFBM_0717 | Mg chelatase. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.687 |
| SFBM_0716 | SFBM_0676 | SFBM_0716 | SFBM_0676 | DNA protecting protein DprA. | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | 0.456 |
| SFBM_0716 | SFBM_0715 | SFBM_0716 | SFBM_0715 | DNA protecting protein DprA. | Mg chelatase. | 0.985 |
| SFBM_0716 | topA | SFBM_0716 | SFBM_0717 | DNA protecting protein DprA. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.921 |
| pheT | SFBM_0676 | SFBM_0479 | SFBM_0676 | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | 0.467 |
| pheT | rplS | SFBM_0479 | SFBM_0672 | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.794 |
| pheT | topA | SFBM_0479 | SFBM_0717 | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.836 |
| rplS | SFBM_0676 | SFBM_0672 | SFBM_0676 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | 0.420 |
| rplS | pheT | SFBM_0672 | SFBM_0479 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.794 |
| rplS | topA | SFBM_0672 | SFBM_0717 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.416 |
| topA | SFBM_0676 | SFBM_0717 | SFBM_0676 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | UPF0102 protein SFBM_0676; NADH oxidase, pseudogene; Belongs to the UPF0102 family. | 0.416 |
| topA | SFBM_0715 | SFBM_0717 | SFBM_0715 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | Mg chelatase. | 0.687 |
| topA | SFBM_0716 | SFBM_0717 | SFBM_0716 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | DNA protecting protein DprA. | 0.921 |
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