STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFBM_1310Magnesium transporter; Similar to MgtE intracellular region. (415 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.789
SFBM_1309
Iron-sulfur cluster-binding protein.
       0.788
SFBM_1308
Glycerol-3-phosphate O-acyltransferase.
       0.775
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.764
SFBM_0156
Aminopeptidase; M18 family.
  
   
 0.687
SFBM_0342
Aminopeptidase.
      
 0.641
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.529
SFBM_1305
Hypothetical protein.
       0.517
SFBM_1311
Hypothetical protein.
       0.492
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.459
Your Current Organism:
Arthromitus sp. SFBmouseJapan
NCBI taxonomy Id: 1029718
Other names: C. Arthromitus sp. SFB-mouse-Japan, Candidatus Arthromitus sp. SFB-mouse-Japan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.