STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFBM_1451Two component sensor histidine kinase. (467 aa)    
Predicted Functional Partners:
SFBM_1452
Two component transcriptional regulator.
   0.985
SFBM_1135
Two component transcriptional regulator; Winged helix family.
   0.906
SFBM_0367
Two-component response regulator.
   0.894
SFBM_0821
Phosphate regulon DNA-binding response regulator.
   0.885
SFBM_0275
DNA-binding response regulator.
 
 0.879
SFBM_0464
Two-component response regulator.
   0.849
prsA
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.820
SFBM_1450
Serine protease.
  
  
 0.803
SFBM_0683
ABC-type sugar transport system.
 
  
 
 0.763
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
     0.734
Your Current Organism:
Arthromitus sp. SFBmouseJapan
NCBI taxonomy Id: 1029718
Other names: C. Arthromitus sp. SFB-mouse-Japan, Candidatus Arthromitus sp. SFB-mouse-Japan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.