STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB47193.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
AHB47304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
AHB49073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
AHB48904.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
AHB47166.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
AHB49839.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.539
AHB47194.1
Crp/Fnr family transcription regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
AHB47192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
AHB48513.1
Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.533
AHB47960.1
Invasion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
AHB48269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
Your Current Organism:
Hyphomicrobium nitrativorans
NCBI taxonomy Id: 1029756
Other names: H. nitrativorans NL23, Hyphomicrobium nitrativorans NL23, Hyphomicrobium sp. NL23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.