STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CINS_0233Putative SmpA / OmlA family lipoprotein; Pfam match to PF04355.8 SmpA_OmlA. (129 aa)    
Predicted Functional Partners:
bamA
Beta-barrel assembly machinery complex, BamA/YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.894
CINS_0928
Beta-barrel assembly machinery complex, BamD/YfiO lipoprotein; Pfam match to PF13525.1 YfiO.
   
 
 0.880
CINS_0234
Hypothetical protein.
       0.782
CINS_0235
Hypothetical protein.
       0.782
CINS_0236
Hypothetical protein.
       0.731
CINS_0237
Hypothetical protein.
       0.656
CINS_0232
Transcriptional regulator, XRE family; Pfam match to PF12844.2 HTH_19.
       0.548
Your Current Organism:
Campylobacter insulaenigrae
NCBI taxonomy Id: 1031564
Other names: C. insulaenigrae NCTC 12927, Campylobacter insulaenigrae DSM 17739, Campylobacter insulaenigrae LMG 22716, Campylobacter insulaenigrae NCTC 12927, Campylobacter insulaenigrae str. NCTC 12927, Campylobacter insulaenigrae strain NCTC 12927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.