STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase; Pfam match to PF00764.15 Arginosuc_synth; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (406 aa)    
Predicted Functional Partners:
argH
Pfam matches to PF00206.16 Lyase_1, and to PF14698.2 ASL_C2.
 
 
 0.996
carB
Carbamoylphosphate synthase, large subunit; Pfam matches to PF02786.13 CPSase_L_D2, and to PF02786.13 CPSase_L_D2, and to PF02787.15 CPSase_L_D3, and to PF02142.18 MGS; Belongs to the CarB family.
 
 
 0.991
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.987
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.927
aspB
Aspartate aminotransferase, aminotransferase, classes I and II; Pfam match to PF00155.17 Aminotran_1_2.
   
 0.923
ansB
Asparaginase II; Bifunctional; Pfam match to PF00710.16 Asparaginase.
   
 
 0.906
pyrB
Aspartate carbamoyltransferase, catalytic subunit; Pfam matches to PF02729.17 OTCace_N, and to PF00185.20 OTCace; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
 
 0.903
AKT90767.1
Aspartate racemase; Pfam match to PF01177.18 Asp_Glu_race.
     
  0.900
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
  
 0.879
argC
N-acetyl-gamma-glutamylphosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  
 0.879
Your Current Organism:
Campylobacter ureolyticus
NCBI taxonomy Id: 1032069
Other names: C. ureolyticus RIGS 9880, Campylobacter ureolyticus RIGS 9880, Campylobacter ureolyticus str. RIGS 9880, Campylobacter ureolyticus strain RIGS 9880
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