STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldBAldehyde dehydrogenase B; Pfam match to PF00171.18 Aldedh; Belongs to the aldehyde dehydrogenase family. (486 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.937
AKT90186.1
Hydrolase, carbon-nitrogen family; Pfam match to PF00795.18 CN_hydrolase.
   
 0.919
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.910
garK
Glycerate kinase; Pfam match to PF02595.11 Gly_kinase; Belongs to the glycerate kinase type-1 family.
   
 
 0.903
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.901
pta
Phosphate acetyltransferase; Bifunctional; Pfam match to PF01515.15 PTA_PTB.
  
 
 0.885
glnA
Glutamine synthetase; Pfam matches to PF00120.20 Gln-synt_C, and to PF03951.15 Gln-synt_N; Belongs to the glutamine synthetase family.
  
 
 0.858
AKT90497.1
Peptidase family M20/M25/M40, putative N-carbamoyl-L-amino acid amidohydrolase; Pfam matches to PF01546.24 Peptidase_M20, and to PF07687.10 M20_dimer.
    
 0.820
purQ
Phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and [...]
     
  0.800
aas
2-acylglycerophosphoethanolamine acyltransferase; Bifunctional; Pfam matches to PF00501.24 AMP-binding, and to PF07690.12 MFS_1, and to PF01553.17 Acyltransferase.
  
 0.731
Your Current Organism:
Campylobacter ureolyticus
NCBI taxonomy Id: 1032069
Other names: C. ureolyticus RIGS 9880, Campylobacter ureolyticus RIGS 9880, Campylobacter ureolyticus str. RIGS 9880, Campylobacter ureolyticus strain RIGS 9880
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