STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLP_31940Hypothetical protein. (319 aa)    
Predicted Functional Partners:
ligC
ATP-dependent DNA ligase LigC.
   
 0.986
ligD
DNA ligase D; Protein synonym:ATP-dependent DNA ligase LigD.
 
  
0.933
ku
DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
  
 0.907
lig
ATP-dependent DNA ligase.
   
 0.791
lysS-2
Putative lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.773
moeB
Putative molybdopterin synthase sulfurylase MoeB; Protein synonym:molybdenum cofactor biosynthesis protein.
       0.544
MLP_31950
Hypothetical protein.
       0.479
MLP_50440
Hypothetical protein.
 
    0.445
MLP_31960
Putative TetR family transcriptional regulator.
       0.413
Your Current Organism:
Microlunatus phosphovorus
NCBI taxonomy Id: 1032480
Other names: M. phosphovorus NM-1, Microlunatus phosphovorus NM-1, Microlunatus phosphovorus str. NM-1, Microlunatus phosphovorus strain NM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.