G5I_01254 protein (Acromyrmex echinatior) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G5I_01254

Trafficking kinesin-binding protein 1. (255 aa)

Predicted Functional Partners:

G5I_10599

0.855

G5I_11928

0.807

G5I_13737

0.790

G5I_02050

0.707

G5I_08844

0.617

G5I_01405

0.543

G5I_10595

0.537

G5I_13164

0.524

G5I_13026

0.428

G5I_01657

0.426

Your Current Organism:

Acromyrmex echinatior

NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G5I_01254	G5I_01405	F4W746	F4W7I9	Trafficking kinesin-binding protein 1.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.543
G5I_01254	G5I_01657	F4W746	F4W877	Trafficking kinesin-binding protein 1.	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.	0.426
G5I_01254	G5I_02050	F4W746	F4W9A2	Trafficking kinesin-binding protein 1.	Huntingtin.	0.707
G5I_01254	G5I_08844	F4W746	F4WSI4	Trafficking kinesin-binding protein 1.	Ly6/PLAUR domain-containing protein 6B.	0.617
G5I_01254	G5I_10595	F4W746	F4WXB1	Trafficking kinesin-binding protein 1.	Metaxin-2.	0.537
G5I_01254	G5I_10599	F4W746	F4WXB5	Trafficking kinesin-binding protein 1.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.855
G5I_01254	G5I_11928	F4W746	F4X0Y2	Trafficking kinesin-binding protein 1.	Tetratricopeptide repeat protein 18.	0.807
G5I_01254	G5I_13026	F4W746	F4X3W3	Trafficking kinesin-binding protein 1.	Kinesin light chain.	0.428
G5I_01254	G5I_13164	F4W746	F4X4A4	Trafficking kinesin-binding protein 1.	Dynactin subunit 1.	0.524
G5I_01254	G5I_13737	F4W746	F4X5U6	Trafficking kinesin-binding protein 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.790
G5I_01405	G5I_01254	F4W7I9	F4W746	Serine/threonine-protein kinase PINK1, mitochondrial.	Trafficking kinesin-binding protein 1.	0.543
G5I_01405	G5I_10599	F4W7I9	F4WXB5	Serine/threonine-protein kinase PINK1, mitochondrial.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.963
G5I_01405	G5I_11928	F4W7I9	F4X0Y2	Serine/threonine-protein kinase PINK1, mitochondrial.	Tetratricopeptide repeat protein 18.	0.542
G5I_01657	G5I_01254	F4W877	F4W746	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.	Trafficking kinesin-binding protein 1.	0.426
G5I_02050	G5I_01254	F4W9A2	F4W746	Huntingtin.	Trafficking kinesin-binding protein 1.	0.707
G5I_02050	G5I_13026	F4W9A2	F4X3W3	Huntingtin.	Kinesin light chain.	0.443
G5I_02050	G5I_13164	F4W9A2	F4X4A4	Huntingtin.	Dynactin subunit 1.	0.577
G5I_08844	G5I_01254	F4WSI4	F4W746	Ly6/PLAUR domain-containing protein 6B.	Trafficking kinesin-binding protein 1.	0.617
G5I_08844	G5I_13026	F4WSI4	F4X3W3	Ly6/PLAUR domain-containing protein 6B.	Kinesin light chain.	0.614
G5I_08844	G5I_13164	F4WSI4	F4X4A4	Ly6/PLAUR domain-containing protein 6B.	Dynactin subunit 1.	0.522