STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_01402La-related protein 6. (538 aa)    
Predicted Functional Partners:
G5I_04878
Serine-threonine kinase receptor-associated protein.
    
 
 0.646
G5I_06395
E3 ubiquitin-protein ligase arkadia-C.
      
 0.590
G5I_07050
Peroxisomal targeting signal 1 receptor.
      
 0.581
G5I_11504
Acyl-protein thioesterase 1.
      
 0.536
G5I_12520
Zinc transporter 2.
      
 0.531
G5I_11051
UDP-sugar transporter UST74c.
      
 0.418
G5I_07390
La-related protein.
      
0.408
G5I_13927
RING finger protein 38.
      
 0.404
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.