STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_02253Leucine-rich repeat-containing protein 27. (558 aa)    
Predicted Functional Partners:
G5I_01161
CCR4-NOT transcription complex subunit 1.
   
 0.789
G5I_11894
CCR4-NOT transcription complex subunit 7.
    
 0.784
G5I_05933
Cell differentiation protein RCD1-like protein.
    
 0.767
G5I_09108
CCR4-NOT transcription complex subunit 4.
    
 0.766
G5I_04171
CCR4-NOT transcription complex subunit 2.
    
 0.758
G5I_00944
CCR4-NOT transcription complex subunit 3.
    
 0.757
G5I_10980
Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
    
 0.671
G5I_08120
Protein PAT1-like protein 1.
    
 
 0.622
G5I_02339
Parafibromin.
   
 
 0.594
G5I_07823
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.576
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.