STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_03237Cleavage and polyadenylation specificity factor subunit 4. (290 aa)    
Predicted Functional Partners:
G5I_00716
Symplekin.
    
 0.999
G5I_02628
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
G5I_06892
WD repeat-containing protein 33.
    
 0.999
G5I_06894
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.999
G5I_11983
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.999
G5I_12900
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.999
G5I_10462
WD repeat-containing protein 82.
    
 0.998
G5I_13053
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.995
G5I_04179
Retinoblastoma-binding protein 6.
    
 
 0.993
G5I_05084
Cleavage stimulation factor 64 kDa subunit.
   
 0.988
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.