STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_05226Chromobox protein-like protein 5. (74 aa)    
Predicted Functional Partners:
G5I_11701
Histone-lysine N-methyltransferase, H3 lysine-9 specific 5.
    
 0.730
G5I_05330
Polycomb protein Sfmbt.
    
 0.720
G5I_01361
Chromodomain-helicase-DNA-binding protein Mi-2-like protein.
    
 0.661
G5I_09482
E3 ubiquitin-protein ligase RING2.
    
 0.620
G5I_03963
Chromatin assembly factor 1 subunit A-B.
    
 
 0.610
G5I_08652
Protein EMSY.
    
 
 0.604
G5I_02353
Histone H3; Belongs to the histone H3 family.
   
 0.583
G5I_04058
Histone H3-like centromeric protein cse-4.
   
 0.583
G5I_08084
Histone H3; Belongs to the histone H3 family.
   
 0.583
G5I_11237
Histone H3; Belongs to the histone H3 family.
   
 0.583
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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